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CAZyme Gene Cluster: MGYG000003892_4|CGC2
CGC gene composition diagram |
Gene composition table |
Substrate predicted by eCAMI subfamily |
Substrate predicted by dbCAN-PUL search |
Genomic context
CGC gene composition diagram
Gene composition table
| Protein ID | Protein Name | Type | Start | End | Strand | Signature |
|---|---|---|---|---|---|---|
| MGYG000003892_00545 | ABC transporter ATP-binding protein YtrE |
TC | 22947 | 23624 | + | 3.A.1.122.6 |
| MGYG000003892_00546 | Vitamin B12 import ATP-binding protein BtuD |
TC | 23612 | 24514 | + | 3.A.1.125.1 |
| MGYG000003892_00547 | Arabinoxylan arabinofuranohydrolase |
CAZyme | 24609 | 26030 | + | CBM22| CBM6| GH43| GH43_16 |
| MGYG000003892_00548 | hypothetical protein |
CAZyme | 26035 | 27564 | + | CBM22| GH43| GH43_10 |
| MGYG000003892_00549 | HTH-type transcriptional activator RhaR |
TF | 27571 | 28500 | - | HTH_AraC+HTH_AraC |
| MGYG000003892_00550 | hypothetical protein |
STP | 28851 | 31757 | + | SBP_bac_1 |
| MGYG000003892_00551 | L-arabinose transport system permease protein AraP |
TC | 31770 | 32708 | + | 3.A.1.1.11 |
| MGYG000003892_00552 | L-arabinose transport system permease protein AraQ |
TC | 32710 | 33570 | + | 3.A.1.1.36 |
| Protein ID | Protein Name | Type | Start | End | Strand | Signature |
Substrate predicted by eCAMI subfamilies is xylan
| Protein ID | eCAMI subfam | CAZyme substrate |
|---|---|---|
| MGYG000003892_00547 | GH43_e11|CBM6_e54|CBM22_e5|3.2.1.8|3.2.1.55|3.2.1.37|3.2.1.- | xylan |
| MGYG000003892_00548 | GH43_e100|CBM22_e16|3.2.1.8|3.2.1.55 | xylan |
Substrate predicted by dbCAN-PUL is arabinan download this fig
